Eduardo R. Mendoza

Adjunct Professor

Biographical Sketch (pdf/497kb)



Research Interests and Areas of Specialization

Mathematical and Computational Biology
Algebra


Educational Background

PhD in Mathematics, University of Bonn
MS in Mathematics, University of Bonn
BS in Mathematics, University of Heidelberg


Selected Research


  • Talabis DAS, Arceo CPP, Mendoza ER. Positive equilibria of a class of power law kinetics. J. Math, Chem (2017). DOI 10.1007/s10910-017-0804-2

  • Cortez MJ, Nazareno AL, Menodoza ER. A computatinal approach to linear conjugacy in a class of power law kinetic systems. J. Math, Chem (2017). DOI 10.1007/s10910-017-0796-y

  • Arceo CPP, Jose EC, Lao AR, Mendoza ER. Reaction networks and kinetics of biochemical systems. Math. Biosci. 283 (2017): 13-29.

  • Talaue CO, del Rosario RCH, Pfeiffer F, Mendoza ER, Oesterhelt D. Model Construction and Analysis of Respiration in Halobacterium Salinarum. PLoS ONE, March 24, 2016, 1-22.

  • Arceo CPP, Jose EC, Marin-Sanguino A, Mendoza ER. Chemical Reaction Network Approaches to Biochemical Systems Theory. Mathematical Biosciences 269 (2015), pp. 135-152.

  • Dobay MPD, Dobay A,  Bantang JY, Mendoza ER.  How many trimers? Modeling influenza A virus fusion yiels a minimum aggregate size of six trimers, three of which are fusogenic.  2011. Molecular Biosystems, Vol 7, No. 10. Chosen as Cover Story of the Oct 2011  issue.

  • Marin-Sanguino A, Mendoza ER, Voit EO, Flux Duality in Non-Linear GMA Systems: Implications for Metabolic Engineering, Journal of Biotechnology 149, Issue 3, Sept 2010

  • Naval PC, Sison LG, Mendoza ER. Parameter estimation with Term-wise Decomposition in Biochemical Network GMA Models by Hybrid Regularized Least Squares-Particle Swarm Optimization. Proceedings of the IEEE Conference on Evolutionary Computation (CEC) 2010, July 18-23, 2010, Barcelona, Spain

  • Gonzalez O, Oberwinkler T, Mansueto, L, Pfeiffer F, Mendoza ER, Zimmer R, Oesterhelt D. Characterization of growth and metabólism of the polyextremophile Natronomonas pharaonis. June 2010, PLoS Computational Biology

  • Schwake G, Youssef S, Kuhr JT, Gude S, David MPC, Mendoza ER, Frey E, Rädler JO, Predictive modeling of non-viral gene transfer,  March 2010. Journal of Biotechnology and Bioengineering . 105: 805-813

  • Gonzalez O, Gronau S, Pfeiffer F, Mendoza ER, Zimmer R, Oesterhelt D. Systems Analysis of Bioenergetics and Growth of the Extreme Halophile Halobacterium salinarum . 2009, PLoS Computational Biology, Vol 5, Issue 4

  • Marin-Sanguino A, Torres, NV, Mendoza ER, Oesterhelt D, Metabolic Engineering with Power-Law and linear logarithmic Systems, Mathematical Biosciences, 2009; Vol 218, 50-8.

  • del Rosario RCH, Mendoza ER, Voit EO. Challenges in lin-log modelling of glycolysis in Lactococcus lactis. IET Systems Biology. 2008;2:136-30.

  • Roenneberg T, Chua EJ, Bernardo R, Mendoza ER . Modelling biological rhythms. Curr Biol. 2008;18:R826-35.

  • Gonzalez OR, Kuper C, Jung K, Naval PC, Mendoza ER. Parameter estimation using simulated annealing for S-system models of biochemical networks. Bioinformatics. 2007;23: 480-6.

  • Mendoza ER. Coding theory and Hadamard Matrices I-II, in Matimyas Matematika, April 1981 & July 1981

  • Mendoza ER. On the group PGL2 over imaginary quadratics integers, in “Recent Advances in Mathematics and its   Applications”, SEAMS 5th Biennial General Meeting & Conference, Hong Kong, June 16-21 1980

  • Mendoza ER. Cohomology of PGL2 over imaginary quadratic integers, Bonner Mathematische Schriften No. 128, 1979